Difference: SusyCaloKilling (1 vs. 13)

Revision 132009-08-24 - JamieBoyd

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META TOPICPARENT name="JamiesWiki"
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  • Mu_comp.gif
  • Jet_comp.gif
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Different Calo killing scenarios

Trying to mask the current dead channels (Jamie)

  • I have had a go at masking the set of dead/problem channels that we have now with the real calorimeter
  • I did this by changing the masking tool to use the LArBadChannelMasker tool (thanks to Walter Lampl for help with this)
  • This can be configured to mask channels for different problems i chose:
ProblemsToMask=["missingFEB","deadReadout","deadPhys","deadCalib","almostDead","highNoiseHG","highNoiseMG","highNoiseLG"]
  • Running with the 'normal' MC database for the bad channels this masks of 528 channels
  • Walter also explained how i can use the DB from real data (for a given run) to mask channels. Using this for run 126000 this masks off 2062 channels.
  • A plot comparing the eta/phi location of the masked channels for the MC and real data DBs is shown below...
  • Masked_cells.gif:
    Masked_cells.gif
  • Because a FEB usually corresponds to ~128 cells that are all in 1 layer probably the effect of running like this on MET will be rather small but we should try it.
  • The code to do this masking can be seen at:
~jboyd/gencomm/groups/UChicago/JetRecovery/src/CellKiller.cxx
~jboyd/gencomm/groups/UChicago/JetRecovery/JetRecovery/CellKiller.h
~jboyd/gencomm/groups/UChicago/JetRecovery/run/esdtoesd.py
~jboyd/gencomm/groups/UChicago/JetRecovery/share/CellKiller.py
  • This isnt killing any cells in the Tile i think (to work on this...)

Killing the HEC sector that was off due to PS problem in 2008

 

Things to do...

First things

  • reoptimize Mt and MET cuts for 1 lepton analysis with killing to get best significance (S/sqrt(B)) (Johan)
Line: 340 to 370
 
META FILEATTACHMENT attachment="El_comp.gif" attr="" comment="" date="1249389112" name="El_comp.gif" path="El_comp.gif" size="20140" stream="El_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="Mu_comp.gif" attr="" comment="" date="1249389134" name="Mu_comp.gif" path="Mu_comp.gif" size="22769" stream="Mu_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="Jet_comp.gif" attr="" comment="" date="1249389156" name="Jet_comp.gif" path="Jet_comp.gif" size="17070" stream="Jet_comp.gif" user="Main.JamieBoyd" version="1"
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META FILEATTACHMENT attachment="Masked_cells.gif" attr="h" comment="" date="1251103450" name="Masked_cells.gif" path="Masked_cells.gif" size="7911" stream="Masked_cells.gif" tmpFilename="/usr/tmp/CGItemp41470" user="jboyd" version="1"
META FILEATTACHMENT attachment="HEChole.tiff" attr="h" comment="" date="1251103990" name="HEChole.tiff" path="HEChole.tiff" size="50450" stream="HEChole.tiff" tmpFilename="/usr/tmp/CGItemp41637" user="jboyd" version="1"

Revision 122009-08-14 - JamieBoyd

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META TOPICPARENT name="JamiesWiki"
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  • El_comp.gif
  • Mu_comp.gif
  • Jet_comp.gif
Added:
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Things to do...

First things

  • reoptimize Mt and MET cuts for 1 lepton analysis with killing to get best significance (S/sqrt(B)) (Johan)
  • plot MET resolution and MET_phi resolution for killing / non-killing (Johan)
  • Re-do analysis veto'ing events where MET points at hole (Johan)
    • How does MET (MET_Phi) resolution look when MET/JET pointing at / close to hole (what is close to...)
  • Understand Tile killing (big hole in Tile only) (Brian)
  • Different killing scenarios - HEC (ala 2008), current LAr FEB holes, 1 PS (kill 3?), ... (Jamie)

For Later

  • Looking at MT dist for W's to see if we could get the MT cut value from data
  • MET resolution (for different samples) for different killings interesting for LAr/Jet/MET groups

Need lepton reco after killing

  • look at change in signal eff due to electrons being killed
  • look at veto'ing muons that point at hole (no isolation possible) - (track isolation???)
  • look at QCD samples - do these now become a significant background when we do killing

Cleaning cuts

  • how does MET resolution look when jet goes in / close-to hole
  • Tile versus LAr (E_LAr / E_tot??) (energy / eta dependent)

Simple Background estimation with killing

  • M_T / 2x2 tiles method with killed MC
  • evaluate how much you gain by remaking MC with 'hole' (small holes scenario)

  • Write note...

New samples needed??

  • W+Jets ??
  • heavy flavour Jets (bbar) (for lots of muons)
  • other susy samples (probably not...)
 -- JamieBoyd - 22 Jun 2009

Revision 112009-08-04 - JamieBoyd

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 csc_reco_trf.py inputRDOFile="+esdInFile+" outputESDFile="+esdOutFile2+" outputAODFile=AOD.059666._00004.pool.root.1 ntupleFile=NONE maxEvents=500 skipEvents=500 geometryVersion=ATLAS-GEO-02-01-00 triggerConfig=lumi1E31_no_Bphysics_no_prescale jobConfig=SetJetConstants-02-000.py DBRelease=/afs/cern.ch/atlas/www/GROUPS/DATABASE/pacman4/DBRelease/DBRelease-6.5.1.tar.gz conditionsTag=OFLCOND-SIM-00-00-06 $@
  • The produced ESDs will have 500 events in each (the merged hits files are 1k events, but in the atlascatlong queue we dont have enough CPU limit to run reco on 1k events so i split this into 2 parts of 500 events each).
Changed:
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  • I have tried to validate the new ESDs i have produced by comparing reco quantities (missing Et, El, Mu, and Jet params) between an ntuple from Brian (with no killing) and from the newly produced ESDs. the plots below show these comparisons (top = plots from official ESD, bottom = plots from home made ESDs). All looks good except Jet quantities are missing - but i think this is due to the ESD -> NTUP stage (which i did in 15.3.0.1 - maybe Brian used something different).
  • MissingET_comp.gif
  • El_comp.gif
  • Mu_comp.gif
  • Jet_comp.gif
 -- JamieBoyd - 22 Jun 2009

META FILEATTACHMENT attachment="eta.phi_comp.gif" attr="" comment="" date="1249375634" name="eta.phi_comp.gif" path="eta.phi_comp.gif" size="18342" stream="eta.phi_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="reco_comp.gif" attr="" comment="" date="1249375673" name="reco_comp.gif" path="reco_comp.gif" size="16871" stream="reco_comp.gif" user="Main.JamieBoyd" version="1"
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META FILEATTACHMENT attachment="MissingET_comp.gif" attr="" comment="" date="1249389082" name="MissingET_comp.gif" path="MissingET_comp.gif" size="11212" stream="MissingET_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="El_comp.gif" attr="" comment="" date="1249389112" name="El_comp.gif" path="El_comp.gif" size="20140" stream="El_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="Mu_comp.gif" attr="" comment="" date="1249389134" name="Mu_comp.gif" path="Mu_comp.gif" size="22769" stream="Mu_comp.gif" user="Main.JamieBoyd" version="1"
META FILEATTACHMENT attachment="Jet_comp.gif" attr="" comment="" date="1249389156" name="Jet_comp.gif" path="Jet_comp.gif" size="17070" stream="Jet_comp.gif" user="Main.JamieBoyd" version="1"

Revision 102009-08-04 - JamieBoyd

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META TOPICPARENT name="JamiesWiki"
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First attempts at stuff

Trying ESDtoAOD

Changed:
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  • working in: ~jboyd/gencomm/susy
  • copied 1 Top (T1) ESD to: mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1
  • working in rel. 14.4.0
source setup.sh -tag=14.4.0  
source $AtlasArea/AtlasOfflineRunTime/cmt/setup.sh         
  • First try the ESD->AOD with no cell killing. so run like:
get_files -jo esdtoaod.py        
# edited this to look like:
# steering file for ESD->AOD step
# see myTopOptions.py for more info

PoolESDInput=["mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1"]
DetDescrVersion='ATLAS-GEO-02-01-00'
# PoolAODOutput="theoutput.AOD.pool.root"
if not 'RootNtupleOutput' in dir():
    RootNtupleOutput="ntuple_fromESDwhileAOD.root"
doCBNT=False

readESD=True
doWriteESD=False 
doWriteAOD=True 
doAOD=True 
doWriteTAG=False 
EvtMax=-1

# main jobOption
include ("RecExCommon/RecExCommon_topOptions.py")

# then run like
athena esdtoaod.py >& log &         
  • Seems to work fine.
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  • Standard ESD->AOD can be done using esdtoaod.py from the release
  • We are using 15.3.0.1,AtlasProduction for all steps from ESD->NTUP
 

Trying ESD to AOD with cell killing

Deleted:
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  • First i set up CVS
export CVSROOT=:gserver:isscvs.cern.ch:/local/reps/atlas
cvs co groups/UChicago/JetRecovery 
  • setup and compile
source setup.sh -tag=14.4.0,oneTest  
source $AtlasArea/AtlasOfflineRunTime/cmt/setup.sh
cd susy/groups/UChicago/JetRecovery/cmt    
cmt config 
gmake -j4   
...
<...>
  • so seems that the genconf stage wasnt dont in the compile (with the errors above). something to do with my CMT setup?
  • enough for today!
  • Brian has got this to compile OK. i will try to run ESDtoAOD with cell killing sometime soon!
 

Setup for do cell killing (By Brian):

  • Job does ESD->ESD with killing followed by regular ESD->AOD (these could probably be combined)
  • scripts are at: /afs/cern.ch/user/a/aagaard/Analysis/SUSY/CellKilling/workdir/CellKill/
Line: 134 to 81
  /castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/Kill3/
    • replace Kill3 with Kill0 for files without cell killing
  • Example ntuples can be found at: /castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/NTUP/Kill3
Added:
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  • Note the above re-runs Jet and MissingET reco after the killing but does not re-run other reco (lepton reco is what we are interested here) - see "Re-Running El / Mu reco in the ESD->AOD step" section below...
 

AOD -> NTUP

  • Using JO written by Till and using EventView
Changed:
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  • These run in 15.1.0,AtlasOffline
  • First i tested on an mc08 AOD downloaded from the grid like:
dq2-get -n 1 mc08.105403.SU3_jimmy_susy.recon.AOD.e352_s462_r541/
  • This worked OK and produced a rootfile ( /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0/myFile.root ) with a tree in it tree0 with contents like:
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Deleted:
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root [1] tree0->GetListOfLeaves()->Print(); Collection name='TObjArray', class='TObjArray', size=79
  OBJ: TLeafD MET_RefFinal_ex MET_RefFinal_ex OBJ: TLeafD MET_RefFinal_ey MET_RefFinal_ey OBJ: TLeafD MET_RefFinal_et MET_RefFinal_et OBJ: TLeafD MET_RefFinal_sumet MET_RefFinal_sumet
Changed:
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OBJ: TLeafD MET_RefEle_ex MET_RefEle_ex OBJ: TLeafD MET_RefEle_ey MET_RefEle_ey OBJ: TLeafD MET_RefEle_et MET_RefEle_et OBJ: TLeafD MET_RefEle_sumet MET_RefEle_sumet OBJ: TLeafD MET_RefMuon_ex MET_RefMuon_ex OBJ: TLeafD MET_RefMuon_ey MET_RefMuon_ey OBJ: TLeafD MET_RefMuon_et MET_RefMuon_et OBJ: TLeafD MET_RefMuon_sumet MET_RefMuon_sumet OBJ: TLeafD MET_RefJet_ex MET_RefJet_ex OBJ: TLeafD MET_RefJet_ey MET_RefJet_ey OBJ: TLeafD MET_RefJet_et MET_RefJet_et OBJ: TLeafD MET_RefJet_sumet MET_RefJet_sumet OBJ: TLeafD MET_RefGamma_ex MET_RefGamma_ex OBJ: TLeafD MET_RefGamma_ey MET_RefGamma_ey OBJ: TLeafD MET_RefGamma_et MET_RefGamma_et OBJ: TLeafD MET_RefGamma_sumet MET_RefGamma_sumet OBJ: TLeafD MET_RefTau_ex MET_RefTau_ex OBJ: TLeafD MET_RefTau_ey MET_RefTau_ey OBJ: TLeafD MET_RefTau_et MET_RefTau_et OBJ: TLeafD MET_RefTau_sumet MET_RefTau_sumet
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OBJ: TLeafD MET_Truth_Int_ex MET_Truth_Int_ex OBJ: TLeafD MET_Truth_Int_ey MET_Truth_Int_ey OBJ: TLeafD MET_Truth_Int_et MET_Truth_Int_et OBJ: TLeafD MET_Truth_Int_sumet MET_Truth_Int_sumet
    • El (reco)
  OBJ: TLeafI El_N El_N
Deleted:
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OBJ: TLeafI Mu_N Mu_N OBJ: TLeafI Jet_N Jet_N
  OBJ: TLeafElement El_E El_E OBJ: TLeafElement El_p_T El_p_T OBJ: TLeafElement El_phi El_phi
Line: 187 to 117
  OBJ: TLeafElement El_etcone30 El_etcone30 OBJ: TLeafElement El_etcone40 El_etcone40 OBJ: TLeafElement El_etcone45 El_etcone45
Added:
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OBJ: TLeafElement El_IsEM El_IsEM OBJ: TLeafElement El_author El_author OBJ: TLeafElement El_Loose El_Loose OBJ: TLeafElement El_Medium El_Medium OBJ: TLeafElement El_Tight El_Tight
    • Muon (reco)
OBJ: TLeafI   Mu_N   Mu_N
  OBJ: TLeafElement Mu_E Mu_E OBJ: TLeafElement Mu_p_T Mu_p_T OBJ: TLeafElement Mu_phi Mu_phi
Line: 197 to 136
  OBJ: TLeafElement Mu_m Mu_m OBJ: TLeafElement Mu_charge Mu_charge OBJ: TLeafElement Mu_pdgId Mu_pdgId
Added:
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OBJ: TLeafElement Mu_etcone40 Mu_etcone40 OBJ: TLeafElement Mu_nucone40 Mu_nucone40 OBJ: TLeafElement Mu_etcone20 Mu_etcone20 OBJ: TLeafElement Mu_matchChi2OverDoF Mu_matchChi2OverDoF OBJ: TLeafElement Mu_fitChi2OverDoF Mu_fitChi2OverDoF OBJ: TLeafElement Mu_SumTrkPtInCone Mu_SumTrkPtInCone OBJ: TLeafElement Mu_etcone10 Mu_etcone10 OBJ: TLeafElement Mu_etcone30 Mu_etcone30 OBJ: TLeafElement Mu_nucone10 Mu_nucone10 OBJ: TLeafElement Mu_nucone20 Mu_nucone20 OBJ: TLeafElement Mu_nucone30 Mu_nucone30 OBJ: TLeafElement Mu_matchChi2 Mu_matchChi2 OBJ: TLeafElement Mu_fitChi2 Mu_fitChi2 OBJ: TLeafElement Mu_hasCluster Mu_hasCluster OBJ: TLeafElement Mu_hasCombinedMuon Mu_hasCombinedMuon OBJ: TLeafElement Mu_bestMatch Mu_bestMatch OBJ: TLeafElement Mu_isCombinedMuon Mu_isCombinedMuon OBJ: TLeafElement Mu_isHighPt Mu_isHighPt OBJ: TLeafElement Mu_nTrkInCone Mu_nTrkInCone OBJ: TLeafElement Mu_hasInDetTrackParticle Mu_hasInDetTrackParticle OBJ: TLeafElement Mu_hasMuonExtrapolatedTrackParticle Mu_hasMuonExtrapolatedTrackParticle OBJ: TLeafElement Mu_hasCombinedMuonTrackParticle Mu_hasCombinedMuonTrackParticle
    • Jet (reco)
OBJ: TLeafI   Jet_N   Jet_N
  OBJ: TLeafElement Jet_E Jet_E OBJ: TLeafElement Jet_p_T Jet_p_T OBJ: TLeafElement Jet_phi Jet_phi
Line: 207 to 172
  OBJ: TLeafElement Jet_m Jet_m OBJ: TLeafElement Jet_charge Jet_charge OBJ: TLeafElement Jet_pdgId Jet_pdgId
Changed:
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OBJ: TLeafElement Jet_weight Jet_weight OBJ: TLeafElement Jet_SoftMuonWeight Jet_SoftMuonWeight OBJ: TLeafElement Jet_SoftElectronWeight Jet_SoftElectronWeight OBJ: TLeafElement Jet_IP1D Jet_IP1D OBJ: TLeafElement Jet_IP2D Jet_IP2D OBJ: TLeafElement Jet_IP3D Jet_IP3D OBJ: TLeafElement Jet_SV1 Jet_SV1 OBJ: TLeafElement Jet_SecVtxTagBU Jet_SecVtxTagBU OBJ: TLeafElement Jet_SV2 Jet_SV2 OBJ: TLeafElement El_IsEM El_IsEM OBJ: TLeafElement El_author El_author OBJ: TLeafElement Jet_SoftMuonNumTrack Jet_SoftMuonNumTrack OBJ: TLeafElement Jet_SoftElectronNumTrack Jet_SoftElectronNumTrack OBJ: TLeafI treeInstance treeInstance OBJ: TLeafI treeCounter treeCounter OBJ: TLeafI treeEventAndInstance treeEventAndInstance OBJ: TLeafI treeRunNumber treeRunNumber OBJ: TLeafI treeNInstance treeNInstance
  • I then tried to run on the AOD i produced above in 14.4.0.
  • I was worried this would not work as i assumed that the AOD EDM would have changed between 14.4.0 and 15.1.0 but in fact it seemed to run OOTB with no errors, and cursory look at some of the NTUP contents looks quite good.
  • Can see this ntuple at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2
  • and the JO used to make it in 15.1.0 at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2/testEV.py
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OBJ: TLeafElement Jet_EinPreSampB Jet_EinPreSampB OBJ: TLeafElement Jet_EinPreSampE Jet_EinPreSampE OBJ: TLeafElement Jet_EinEMB1 Jet_EinEMB1 OBJ: TLeafElement Jet_EinEMB2 Jet_EinEMB2 OBJ: TLeafElement Jet_EinEMB3 Jet_EinEMB3 OBJ: TLeafElement Jet_EinEME1 Jet_EinEME1 OBJ: TLeafElement Jet_EinEME2 Jet_EinEME2 OBJ: TLeafElement Jet_EinEME3 Jet_EinEME3 OBJ: TLeafElement Jet_EinHEC0 Jet_EinHEC0 OBJ: TLeafElement Jet_EinHEC1 Jet_EinHEC1 OBJ: TLeafElement Jet_EinHEC2 Jet_EinHEC2 OBJ: TLeafElement Jet_EinHEC3 Jet_EinHEC3 OBJ: TLeafElement Jet_EinTileBar0 Jet_EinTileBar0 OBJ: TLeafElement Jet_EinTileBar1 Jet_EinTileBar1 OBJ: TLeafElement Jet_EinTileBar2 Jet_EinTileBar2 OBJ: TLeafElement Jet_EinTileGap1 Jet_EinTileGap1 OBJ: TLeafElement Jet_EinTileGap2 Jet_EinTileGap2 OBJ: TLeafElement Jet_EinTileGap3 Jet_EinTileGap3 OBJ: TLeafElement Jet_EinTileExt0 Jet_EinTileExt0 OBJ: TLeafElement Jet_EinTileExt1 Jet_EinTileExt1 OBJ: TLeafElement Jet_EinTileExt2 Jet_EinTileExt2 OBJ: TLeafElement Jet_EinFCAL0 Jet_EinFCAL0 OBJ: TLeafElement Jet_EinFCAL1 Jet_EinFCAL1 OBJ: TLeafElement Jet_EinFCAL2 Jet_EinFCAL2 OBJ: TLeafElement Jet_EinUnknown Jet_EinUnknown OBJ: TLeafElement Jet_EinCryostat Jet_EinCryostat
 

Some NTUPS to play with

Changed:
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  • Using the scripts in: /afs/cern.ch/user/j/jboyd/gencomm/susy/ESDtoAODing i have made AODs from 100 of the T1 ESDs and put the directly on the cern tier3 castor disk
  • These AODs are at: /castor/cern.ch/grid/atlas/atlt3/susy/jboyd/AODs/test/
  • Then using scripts in: /afs/cern.ch/user/j/jboyd/gencomm/susy/AODtoNTUPing i have made ntuples which are at: /castor/cern.ch/grid/atlas/atlt3/susy/jboyd/NTUPs/test/
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  • Brian has made ntuples for 3 killing scenarios (no killing (Kill0), little killing (Kill3) and large killing (Kill4))
  • He has put ntuples from these at:
/castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/NTUP
and on afs at:
/afs/cern.ch/user/a/aagaard/scratch0/SUSY/NtupleProd/ntuples/
  • These are for some smallish jet samples (J5, J7), large ttbar stats and small SU3 stats.
 
  • These can be opened directly in root like:
>export STAGE_SVCCLASS=atlt3
>root -l                                                                             
root [0] TChain* ch = new TChain("tree0");                                                             
Changed:
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root [1] ch->Add("/castor/cern.ch/grid/atlas/atlt3/susy/jboyd/NTUPs/test/NTUP.063975._03062.root");
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root [1] ch->Add("/castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/NTUP/Kill4/ttbar/NTUP.9.root");
 root [2] ch->Draw("El_N");
Line: 250 to 223
 
Added:
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Re-Running El / Mu reco in the ESD->AOD step

  • I have been looking at re-running the lepton reco in the ESD->AOD step
  • I have been using the release 15.3.0.2,AtlasProduction
  • For now this is the unvalidated cache which means you need to setup like:
source setup.sh -tag=15.3.0
export CMTPATH=/afs/cern.ch/atlas/software/unvalidated/caches/15.3.0.2/AtlasProduction/15.3.0.2
source /afs/cern.ch/atlas/software/unvalidated/caches/15.3.0.2/AtlasProduction/15.3.0.2/AtlasProductionRunTime/cmt/setup.sh
  • In order to re-run e-gamm need the tag: Reconstruction/egamma/egammaTools-00-02-26-04
  • At the moment cant seem to re-run muon reco - due to this bug http://savannah.cern.ch/bugs/?53797 (we would hope that muon reco is less effected by calo killing, but the isolation would be effected)
  • Running with JO with the flags:
rec.Commissioning.set_Value_and_Lock(False)
from MuonRecExample.MuonRecFlags import muonRecFlags
muonRecFlags.doCSCs = False
rec.doJetMissingETTag=False
rec.doEgamma=True
rec.doMuonCombined=False
rec.doTau=False
rec.doAOD=True
rec.doWriteAOD=True
rec.doWriteTAG=False    
rec.doWriteTAGCOM=False
rec.doMonitoring=False
rec.doCBNT=False
rec.doDPD=False
rec.Production=True
globalflags.InputFormat.set_Value_and_Lock('pool')
rec.readESD.set_Value_and_Lock( True )
rec.readRDO.set_Value_and_Lock( False )
athenaCommonFlags.PoolESDInput.set_Value_and_Lock( ["InputESD.pool.root"] )
rec.doESD.set_Value_and_Lock( True )
rec.doWriteESD.set_Value_and_Lock( False ) 
athenaCommonFlags.PoolAODOutput.set_Value_and_Lock( "output_AOD.pool.root" )
  • eg. see the JO file at: /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/ReRunRecoFromEsd/jamie.ESDtoESD.py
  • Proof that this works can be seen in the plots below
  • Here we have 2 sets of plots. coming from the paths
ESD(with calo killing) -> esdtoaod.py -> AOD -> testEV.py -> NTUP -> Plot                  (default path)
ESD(with calo killing) -> jamie.ESDtoESD.py -> AOD -> testEV.py -> NTUP -> Plot        (re-reco path)
  • eta.phi_comp.gif
  • reco_comp.gif
  • So can see that the El reco is effected by killed region (as expected), Muon and missingEt reco is not effected (as expected), Jet reco looks effected - but thats because the default path isnt copying the Jets into the NTUP correctly (with messages like
StoreGateSvc      WARNING retrieve(const): No valid proxy for object Cone4H1TowerJets  of type JetCollection(CLID 1162448536)
ControlSampleLo...  ERROR Could not retrieve container (Cone4H1TowerJets)

Increasing the SU3 statistics

  • For the SU3 dataset we are interested in (mc08) only 1 in 10 ESDs are kept - so we have very low statistics
  • I have been looking at re-running the reco from the stored HITS files (in order to increase our ESD statistics by a factor of 10)
  • I requested that the dataset mc08.105200.T1_McAtNlo_Jimmy.merge.HITS.e357_s462_s520 be replicated to the atlprod cern castor disk (this is available at: /castor/cern.ch/grid/atlas/atlasmcdisk/mc08/HITS/mc08.105200.T1_McAtNlo_Jimmy.merge.HITS.e357_s462_s520_tid056879 ).
  • I am rerunning digitization and reco on this data putting the resulting RDOs and ESDs to the atlt3 castor disk at:
/castor/cern.ch/grid/atlas/atlt3/susy/jboyd/susyESDs
  • digitization and reco were run in release AtlasProduction,14.2.25.8 (the same as used to make the other ESDs we are using)
  • The commands used to run the digitization is:
csc_digi_trf.py inputHitsFile="+esdInFile+" outputRDOFile="+esdOutFile+" maxEvents=-1 skipEvents=0 geometryVersion=ATLAS-GEO-02-01-00 digiSeedOffset1=4 digiSeedOffset2=4 minbiasHitsFile=NONE cavernHitsFile=NONE jobConfig=NONE DBRelease=/afs/cern.ch/atlas/www/GROUPS/DATABASE/pacman4/DBRelease/DBRelease-6.5.1.tar.gz digiRndmSvc=AtRanluxGenSvc samplingFractionDbTag=QGSP_BERT triggerConfig=lumi1E31_no_Bphysics_no_prescale beamHaloHitsFile=NONE beamGasHitsFile=NONE doAllNoise=NONE AddCaloDigi=False conditionsTag=OFLCOND-SIM-00-00-06 IgnoreConfigError=False $@
  • and for reco it is
csc_reco_trf.py inputRDOFile="+esdInFile+" outputESDFile="+esdOutFile2+" outputAODFile=AOD.059666._00004.pool.root.1 ntupleFile=NONE maxEvents=500 skipEvents=500 geometryVersion=ATLAS-GEO-02-01-00 triggerConfig=lumi1E31_no_Bphysics_no_prescale jobConfig=SetJetConstants-02-000.py DBRelease=/afs/cern.ch/atlas/www/GROUPS/DATABASE/pacman4/DBRelease/DBRelease-6.5.1.tar.gz conditionsTag=OFLCOND-SIM-00-00-06 $@
  • The produced ESDs will have 500 events in each (the merged hits files are 1k events, but in the atlascatlong queue we dont have enough CPU limit to run reco on 1k events so i split this into 2 parts of 500 events each).
  -- JamieBoyd - 22 Jun 2009
Added:
>
>

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META FILEATTACHMENT attachment="reco_comp.gif" attr="" comment="" date="1249375673" name="reco_comp.gif" path="reco_comp.gif" size="16871" stream="reco_comp.gif" user="Main.JamieBoyd" version="1"

Revision 82009-07-17 - BrianPetersen

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META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

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  • enough for today!
  • Brian has got this to compile OK. i will try to run ESDtoAOD with cell killing sometime soon!
Added:
>
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Setup for do cell killing (By Brian):

  • Job does ESD->ESD with killing followed by regular ESD->AOD (these could probably be combined)
  • scripts are at: /afs/cern.ch/user/a/aagaard/Analysis/SUSY/CellKilling/workdir/CellKill/
    • esdtoesd.py runs the cell killing
    • esdtoaod.py obvious...
    • cellKillJob.py is batch job doing the two above (needs run.sh as well)
    • submit.py for submitting batch jobs based on data files defined in files.py
  • esdtoesd.py is based of JetRecovery_topOptions.py from cellkilling package
    • ntuple dumper has been turned off together with jo to set it up
    • JetRecovery/JetAlgs.py was modified to turn on Cone4Tower jets
      • this works after btagging is turned off
  • Currently only jets and MET is rerun in ESD->ESD step
    • need to turn on at least the electron reconstruction as well

  • Ntuple production has been updated to 15.3.0 and run out of /afs/cern.ch/user/a/aagaard/Analysis/SUSY/NtupleProd/workdir
  • Example cell killed AOD files can be found at: /castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/Kill3/
    • replace Kill3 with Kill0 for files without cell killing
  • Example ntuples can be found at: /castor/cern.ch/grid/atlas/atlt3/scratch/aagaard/CellKilling/NTUP/Kill3
 

AOD -> NTUP

  • Using JO written by Till and using EventView
  • These run in 15.1.0,AtlasOffline

Revision 72009-07-10 - JamieBoyd

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META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Revision 62009-07-09 - JamieBoyd

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META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

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 cmt config gmake -j4 ...
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#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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#CMT--->
Warning: template not expected in pattern install_scripts (from eformat) #CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/i686-slc4-gcc34-opt.make
 <...>
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#CMT---> (constituents.make) Building install_includes.make
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#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Info: Document install_includes
#CMT---> (constituents.make) Creating install_includes.lock and Starting install_includes
Installing files from standard ../JetRecovery to /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/include
installation done
#CMT---> (constituents.make) install_includes done
#CMT---> (constituents.make) Building JetRecovery.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (constituents.make) Rebuilding ../i686-slc4-gcc34-opt/setup_JetRecovery_check_install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
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#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Info: Library JetRecovery
#CMT---> (constituents.make) Starting JetRecovery
#CMT---> (JetRecovery.make) Rebuilding ../i686-slc4-gcc34-opt/JetRecovery_dependencies.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (constituents.make) Building JetRecovery_check_install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document JetRecovery_check_install_joboptions
#CMT---> (constituents.make) Creating JetRecovery_check_install_joboptions.lock and Starting JetRecovery_check_install_joboptions
#CMT---> (constituents.make) JetRecovery_check_install_joboptions done
#CMT---> (constituents.make) Building install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document install_joboptions
#CMT---> (constituents.make) Creating install_joboptions.lock and Starting install_joboptions
<...>
../src/NtupleDumper.cxx:974: warning: comparison between signed and unsigned integer expressions
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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<...>
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> installing file SaveJets.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file TopAlgFix.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
installation done
installation done
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file TrackTools.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file Trigger.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
#CMT---> (constituents.make) install_joboptions done
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
g++ -m32 -m32 -m32 -L/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasOffline/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasAnalysis/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasSimulation/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/dist/AtlasSettings/AtlasSettings-03-02-17/share/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasTrigger/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasReconstruction/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasEvent/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasConditions/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/GAUDI/v19r9p2/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/DetCommon/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/LCGCMT/LCGCMT_54h/InstallArea/i686-slc4-gcc34-opt/lib -shared -m32 -o libJetRecovery.so "JetRecoverytemp_shlib/CellKiller.o" "JetRecoverytemp_shlib/JetRecovery_entries.o" "JetRecoverytemp_shlib/JetRecovery_load.o" "JetRecoverytemp_shlib/MathUtil.o" "JetRecoverytemp_shlib/NtupleDumper.o" -shared -fPIC -ldl -pthread -Wl,--no-undefined -m32 -Wl,-s -m32 -L/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasOffline/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasAnalysis/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasSimulation/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/dist/AtlasSettings/AtlasSettings-03-02-17/share/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasTrigger/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasReconstruction/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasEvent/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasConditions/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/GAUDI/v19r9p2/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/DetCommon/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/LCGCMT/LCGCMT_54h/InstallArea/i686-slc4-gcc34-opt/lib -lAnalysisUtilsLib -lMcParticleEvent -lMissingETEvent -lTruthHelper -lParticleTruth -lGeneratorObjects -lAthenaBaseComps -lJetRecLib -lJetUtils -lCaloUtilsLib -lCaloEvent -lTileConditionsLib -lCaloDetDescrLib -lLArReadoutGeometry -lLArHV -lLArToolsLib -lLArIdentifier -lTileIdentifier -lCaloIdentifier -lGeoModelSvcLib -lIOVSvcLib -lTrigDecisionLib -lTrigSteeringLib -lTrigMonitorBaseLib -lTrigInterfacesLib -lAthenaMonitoringLib -lTrigSteeringEvent -lTrigNavigationLib -lTrigSerializeCnvSvcLib -lTrigSerializeTPLib -lAthenaPoolCnvSvcLib -lTrigConfigSvcLib -lStoreGateLib -lEventInfo -lJetEvent -lParticleEvent -lFourMomUtils -lNavFourMom -lParticle -lAtlfastEvent -lFourMom -lNavigation -lTrkParticleBase -lVxVertex -lTrkTrack -lTrkExUtils -lTrkPatternParameters -lTrkVolumes -lTrkParameters -lTrkNeutralParameters -lTrkParametersBase -lTrkMaterialOnTrack -lTrkGeometrySurfaces -lTrkSurfaces -lTrkDetDescrUtils -lIOVDbDataModel -lTrkPrepRawData -lTrigT1Result -lTrigT1Interfaces -lDataModel -lDBDataModel -lAtlasDetDescr -lCaloConditions -lTrigSerializeResultLib -lSGTools -lSGAudCore -lAraTool -lCBNT_UtilsLib -lOjfJet -lAthenaKernel -lCxxUtils -lTrkEventPrimitives -lTrkDetElementBase -lIdDict -lIdentifier -lGeoModelKernel -lTrkTrackSummary -lPathResolver -lTestTools -lKtJet -lTileCalibBlobObjs -lGenzModuleEvent -lTrigTimeAlgsLib -L/afs/cern.ch/atlas/project/tdaq/prod/tdaq-common/tdaq-common-01-09-03/installed/i686-slc4-gcc34-opt/lib -leformat -leformat_write -lDataReader -leformat_old -lDataWriter -ldl -lthreads -lers -ldynlibs -L/afs/cern.ch/sw/lcg/external/HepMC/2.03.09/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lHepMC -Wl,--as-needed -L/afs/cern.ch/sw/lcg/external/HepMC/2.03.09/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lHepMC -Wl,--as-needed -lGaudiPythonLib -lGaudiAlgLib -lGaudiUtilsLib -lGaudiKernel -lTrigConfStorage -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lReflex -L/afs/cern.ch/sw/lcg/app/releases/POOL/POOL_2_7_7/slc4_ia32_gcc34/lib -llcg_CollectionBase -llcg_CollectionBase -llcg_Collection -llcg_FileCatalog -llcg_DataSvc -llcg_PersistencySvc -llcg_StorageSvc -llcg_AttributeList -llcg_POOLCore -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lMathMore -lMinuit -lMinuit2 -lMatrix -lPhysics -lHistPainter -lHist -lRint -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lCore -lCint -lTree -lHist -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lGraf -lGraf3d -lGpad -lHtml -lPostscript -lGui -lGX11TTF -lGX11 -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lTable -lRIO -L/afs/cern.ch/sw/lcg/external/Python/2.5/slc4_ia32_gcc34/lib -lpython2.5 -lutil -lpthread -L/afs/cern.ch/sw/lcg/external/fastjet/2.3.0/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lfastjet -lsiscone -lSISConePlugin -lCDFConesPlugin -Wl,--as-needed -L/afs/cern.ch/sw/lcg/app/releases/COOL/COOL_2_4_0b/slc4_ia32_gcc34/lib -llcg_CoolKernel -L/afs/cern.ch/sw/lcg/app/releases/SEAL/SEAL_1_9_4/slc4_ia32_gcc34/lib -llcg_SealBase -llcg_PluginManager -llcg_SealKernel -L/afs/cern.ch/sw/lcg/app/releases/CORAL/CORAL_1_9_8/slc4_ia32_gcc34/lib -llcg_CoralBase -llcg_RelationalAccess -L/afs/cern.ch/sw/lcg/external/Boost/1.34.1_python2.5/slc4_ia32_gcc34/lib -lboost_filesystem-gcc34-mt -lboost_regex-gcc34-mt -lboost_thread-gcc34-mt -lboost_filesystem-gcc34-mt -L/afs/cern.ch/sw/lcg/external/clhep/1.9.3.1/slc4_ia32_gcc34/lib -lCLHEP-Cast-1.9.3.1 -lCLHEP-Evaluator-1.9.3.1 -lCLHEP-Exceptions-1.9.3.1 -lCLHEP-GenericFunctions-1.9.3.1 -lCLHEP-Geometry-1.9.3.1 -lCLHEP-RandomObjects-1.9.3.1 -lCLHEP-RefCount-1.9.3.1 -lCLHEP-Matrix-1.9.3.1 -Wl,--no-as-needed -lCLHEP-Vector-1.9.3.1 -lCLHEP-Random-1.9.3.1 -Wl,--as-needed -L/afs/cern.ch/sw/lcg/external/uuid/1.38/slc4_ia32_gcc34/lib -luuid -L/afs/cern.ch/sw/lcg/external/XercesC/2.8.0/slc4_ia32_gcc34/lib -lxerces-c -lxerces-depdom -lpthread -L/afs/cern.ch/sw/lcg/external/HepPDT/2.02.02/slc4_ia32_gcc34/lib -lHepPDT -lHepPID -lHepPID -lTrigConfHLTData -lTrigConfL1Data -lTrigConfJobOptData
Installing library libJetRecovery.so into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib

> JetRecovery : library ok installation done #CMT---> JetRecovery ok #CMT---> (constituents.make) JetRecovery done #CMT---> (constituents.make) Building JetRecoveryConf.make #CMT---> (constituents.make) Building JetRecoveryCLIDDB.make #CMT---> (constituents.make) Building JetRecoveryRootMap.make #CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*' #CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*' #CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*' #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Info: Document JetRecoveryConf #CMT---> (constituents.make) Creating JetRecoveryConf.lock and Starting JetRecoveryConf #CMT---> Info: Document JetRecoveryRootMap #CMT---> Info: Document JetRecoveryCLIDDB #CMT--->
(constituents.make) Creating JetRecoveryRootMap.lock and Starting JetRecoveryRootMap #CMT---> (constituents.make) Creating JetRecoveryCLIDDB.lock and Starting JetRecoveryCLIDDB Generating rootmap file for libJetRecovery.so
> genCLIDDB.exe [JetRecovery] :::::: libraries : [ JetRecovery ] :::::: :::: processing library: JetRecovery... PackageInfo::PackageInfo(v*): invalid argument PackageInfo should be constructed passing a string of the form PACKAGE-VERSION. Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form MyPackage-01-02-03 Notice that version.cmt is created automatically by CMT when you use 'cmt co'

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo Parameters = Qualifiers = 'ers' host = lxplus249.cern.ch user = jboyd (6573) process id = 18827 thread id = 18827 process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/i686-slc4-gcc34-opt /bin/sh: line 1: 18827 Aborted /afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/bin/genmap -i libJetRecovery.so -o ../i686-slc4-gcc34-opt/JetRecovery.rootmap gmake[3]: * [../i686-slc4-gcc34-opt/JetRecovery.rootmap] Error 134 gmake[2]: * [JetRecoveryRootMap] Error 2 gmake[2]: * Waiting for unfinished jobs.... PackageInfo::PackageInfo(v*): invalid argument PackageInfo should be constructed passing a string of the form PACKAGE-VERSION. Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form MyPackage-01-02-03 Notice that version.cmt is created automatically by CMT when you use 'cmt co'

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo Parameters = Qualifiers = 'ers' host = lxplus249.cern.ch user = jboyd (6573) process id = 18816 thread id = 18816 process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/cmt gmake[3]: * [/afs/cern.ch/user/j/jboyd/gencomm/susy/groups/UChicago/JetRecovery/genConf/JetRecovery/JetRecoveryConf.py] Aborted gmake[2]: * [JetRecoveryConf] Error 2 ::: ERROR during 'genCLIDDB.exe' execution... (exit code=34304) Generating clid.db for package JetRecovery. Resulting clid.db will be written to /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db. ApplicationMgr SUCCESS ================================================================================================================================ Welcome to ApplicationMgr $Revision: 1.72 $ running on lxplus249.cern.ch on Mon Jun 22 20:37:12 2009 ================================================================================================================================ ApplicationMgr INFO Application Manager Configured successfully EventLoopMgr WARNING Unable to locate service "EventSelector" EventLoopMgr WARNING No events will be processed from external input. HistogramPersis... INFO 'CnvServices':[ 'HbookHistSvc' , 'RootHistSvc' ] HistogramPersis...WARNING Histograms saving not required. ApplicationMgr INFO Application Manager Initialized successfully ApplicationMgr Ready ClassIDSvc INFO Initializing ClassIDSvc - package version CLIDComps-00-04-08 ClassIDSvc INFO getRegistryEntries: read 0 CLIDRegistry entries for module ALL PackageInfo::PackageInfo(v*): invalid argument PackageInfo should be constructed passing a string of the form PACKAGE-VERSION. Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form MyPackage-01-02-03 Notice that version.cmt is created automatically by CMT when you use 'cmt co'

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo Parameters = Qualifiers = 'ers' host = lxplus249.cern.ch user = jboyd (6573) process id = 18835 thread id = 18835 process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/cmt Reading clid.db from /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db. sh: line 1: 18835 Aborted /afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/bin/genCLIDDB.exe -p JetRecovery -i/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db -o /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db cp: cannot stat `/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db': No such file or directory gmake[3]: * [/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db] Error 1 gmake[2]: * [JetRecoveryCLIDDB] Error 2 gmake[1]: * [common_target] Error 2 gmake: * [check_config] Error 2

  • Not sure if this is OK?
  • I then copied JetRecovery_topOptions.py into my run dir and edited to have:
    if esdVersion=='14010003':
        PoolESDInput=["mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1"]
        DetDescrVersion='ATLAS-GEO-02-01-00'
  • and then tried to run
>athena.py  -c "baseName='JetRecovery'; EvtMax=-1; KillCalo=2; startFromJ5=0; upToJ5=1; doRebuild=True; esdVersion='14010003'" ./JetRecovery_topOptions.py 
Mon Jun 22 21:00:22 CEST 2009
Py:ConfigurableDb    INFO Read module info for 3828 configurables from 9 genConfDb files
Py:ConfigurableDb    INFO No duplicates have been found: that's good !
Py:Athena            INFO including file "AthenaCommon/Bootstrap.py"
Py:Athena            INFO including file "AthenaCommon/Atlas.UnixStandardJob.py"
Py:Athena            INFO executing CLI (-c) command: "baseName='JetRecovery'; EvtMax=-1; KillCalo=2; startFromJ5=0; upToJ5=1; doRebuild=True; esdVersion='14010003'"
Py:Athena            INFO including file "./JetRecovery_topOptions.py"
KillCalo =  2
doRebuild =  True
Py:Athena            INFO including file "JetRecovery/SaveJets.py"
Py:Athena            INFO including file "JetRecovery/CellKiller.py"
Shortened traceback (most recent user call last):
  File "/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/share/bin/athena.py", line 434, in <module>
    include( script )
  File "./JetRecovery_topOptions.py", line 47, in <module>
    include("JetRecovery/CellKiller.py")
  File "/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery/CellKiller.py", line 4, in <module>
    from JetRecovery.JetRecoveryConf import CellKiller
ImportError: No module named JetRecovery.JetRecoveryConf
Py:Athena            INFO leaving with code 3: "an error occurred when importing a file"
 
  • so seems that the genconf stage wasnt dont in the compile (with the errors above). something to do with my CMT setup?
  • enough for today!
Added:
>
>
  • Brian has got this to compile OK. i will try to run ESDtoAOD with cell killing sometime soon!
 

AOD -> NTUP

  • Using JO written by Till and using EventView

Revision 52009-06-29 - JamieBoyd

Line: 1 to 1
 
META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Line: 110 to 110
 
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
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#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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#CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/setup.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/constituents.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> (constituents.make) Rebuilding ../i686-slc4-gcc34-opt/i686-slc4-gcc34-opt_JetRecovery_check_install_joboptions.make
#CMT---> (constituents.make) Rebuilding library links
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT--->
Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from eformat)
>
>
<...>
 
#CMT---> (constituents.make) Building install_includes.make
#CMT--->
(constituents.make) all done #CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT--->
Info: Document install_joboptions #CMT---> (constituents.make) Creating install_joboptions.lock and Starting install_joboptions
Changed:
<
<
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
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#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> installing file BuildClusters.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> installing file CellKiller.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file DumpTracks.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> compiling ../src/CellKiller.cxx
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> installing file InputFiles14022003.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> installing file InputFiles14010003.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> compiling ../src/MathUtil.cxx
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> compiling ../src/NtupleDumper.cxx
#CMT---> installing file JetAlgs.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
../src/CellKiller.cxx:190: warning: unused parameter 'gain'
../src/CellKiller.cxx:190: warning: unused parameter 'channel'
../src/CellKiller.cxx:185: warning: unused parameter 'id'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> compiling ../src/components/JetRecovery_entries.cxx
#CMT---> installing file JetRecovery_topOptions.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> compiling ../src/components/JetRecovery_load.cxx
#CMT---> installing file NtupleDumper.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (JetRecovery.make) PEDANTIC: ../i686-slc4-gcc34-opt//JetRecoverysetup.make: No rule for such target
#CMT---> (JetRecovery.make): ../i686-slc4-gcc34-opt//JetRecoverysetup.make: File no longer generated
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT--->
Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*' ../src/NtupleDumper.cxx: In member function `bool NtupleDumper::passTrackQualityCuts(Rec::TrackParticle*)': ../src/NtupleDumper.cxx:433: warning: unused variable 'primVertex' ../src/NtupleDumper.cxx:441: warning: unused variable 'phi0' ../src/NtupleDumper.cxx: In member function `void NtupleDumper::getConesFromTracks(std::vector<Cone, std::allocator >&, std::vector<Rec::TrackParticle*, std::allocator<Rec::TrackParticle*> >&, const double&, const double&, const double&, const int&)': ../src/NtupleDumper.cxx:482: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:506: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:513: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:525: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:551: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx: In member function `StatusCode NtupleDumper::gatherObservables()': ../src/NtupleDumper.cxx:755: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:762: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:772: warning: unused variable 'caloSample' ../src/NtupleDumper.cxx:786: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:810: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:816: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:842: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:847: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:849: warning: comparison between signed and unsigned integer expressions ../src/NtupleDumper.cxx:958: warning: comparison between signed and unsigned integer expressions
>
>
<...>
 
../src/NtupleDumper.cxx:974: warning: comparison between signed and unsigned integer expressions
#CMT--->
Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*' #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy)
Changed:
<
<
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> installing file NtupleDumper_topOptions.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file SaveClusters.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> building library
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template  not expected in pattern install_scripts (from eformat)
#CMT--->
Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from TDAQCPolicy)
>
>
<...>
 
#CMT---> Warning: template  not expected in pattern install_scripts (from TDAQCPolicy)
#CMT--->
Warning: template not expected in pattern install_scripts (from eformat) #CMT---> Warning: template not expected in pattern install_scripts (from eformat)
Line: 663 to 464
 
  • Can see this ntuple at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2
  • and the JO used to make it in 15.1.0 at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2/testEV.py
Changed:
<
<
>
>

Some NTUPS to play with

  • Using the scripts in: /afs/cern.ch/user/j/jboyd/gencomm/susy/ESDtoAODing i have made AODs from 100 of the T1 ESDs and put the directly on the cern tier3 castor disk
  • These AODs are at: /castor/cern.ch/grid/atlas/atlt3/susy/jboyd/AODs/test/
  • Then using scripts in: /afs/cern.ch/user/j/jboyd/gencomm/susy/AODtoNTUPing i have made ntuples which are at: /castor/cern.ch/grid/atlas/atlt3/susy/jboyd/NTUPs/test/
  • These can be opened directly in root like:
>export STAGE_SVCCLASS=atlt3
>root -l                                                                             
root [0] TChain* ch = new TChain("tree0");                                                             
root [1] ch->Add("/castor/cern.ch/grid/atlas/atlt3/susy/jboyd/NTUPs/test/NTUP.063975._03062.root");
root [2] ch->Draw("El_N");                                                                         
 

NTUP -> PLOTS in SPYROOT

  • Need to apply final object reconstruction, isolation and overlap removal at the ntuple level

Revision 42009-06-29 - JamieBoyd

Line: 1 to 1
 
META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Line: 567 to 567
 
  • so seems that the genconf stage wasnt dont in the compile (with the errors above). something to do with my CMT setup?
  • enough for today!
Added:
>
>

AOD -> NTUP

  • Using JO written by Till and using EventView
  • These run in 15.1.0,AtlasOffline
  • First i tested on an mc08 AOD downloaded from the grid like:
dq2-get -n 1 mc08.105403.SU3_jimmy_susy.recon.AOD.e352_s462_r541/
  • This worked OK and produced a rootfile ( /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0/myFile.root ) with a tree in it tree0 with contents like:
root [1] tree0->GetListOfLeaves()->Print();        
Collection name='TObjArray', class='TObjArray', size=79
 OBJ: TLeafD   MET_RefFinal_ex   MET_RefFinal_ex
 OBJ: TLeafD   MET_RefFinal_ey   MET_RefFinal_ey
 OBJ: TLeafD   MET_RefFinal_et   MET_RefFinal_et
 OBJ: TLeafD   MET_RefFinal_sumet   MET_RefFinal_sumet
 OBJ: TLeafD   MET_RefEle_ex   MET_RefEle_ex
 OBJ: TLeafD   MET_RefEle_ey   MET_RefEle_ey
 OBJ: TLeafD   MET_RefEle_et   MET_RefEle_et
 OBJ: TLeafD   MET_RefEle_sumet   MET_RefEle_sumet
 OBJ: TLeafD   MET_RefMuon_ex   MET_RefMuon_ex
 OBJ: TLeafD   MET_RefMuon_ey   MET_RefMuon_ey
 OBJ: TLeafD   MET_RefMuon_et   MET_RefMuon_et
 OBJ: TLeafD   MET_RefMuon_sumet   MET_RefMuon_sumet
 OBJ: TLeafD   MET_RefJet_ex   MET_RefJet_ex
 OBJ: TLeafD   MET_RefJet_ey   MET_RefJet_ey
 OBJ: TLeafD   MET_RefJet_et   MET_RefJet_et
 OBJ: TLeafD   MET_RefJet_sumet   MET_RefJet_sumet
 OBJ: TLeafD   MET_RefGamma_ex   MET_RefGamma_ex
 OBJ: TLeafD   MET_RefGamma_ey   MET_RefGamma_ey
 OBJ: TLeafD   MET_RefGamma_et   MET_RefGamma_et
 OBJ: TLeafD   MET_RefGamma_sumet   MET_RefGamma_sumet
 OBJ: TLeafD   MET_RefTau_ex   MET_RefTau_ex
 OBJ: TLeafD   MET_RefTau_ey   MET_RefTau_ey
 OBJ: TLeafD   MET_RefTau_et   MET_RefTau_et
 OBJ: TLeafD   MET_RefTau_sumet   MET_RefTau_sumet
 OBJ: TLeafI   El_N   El_N
 OBJ: TLeafI   Mu_N   Mu_N
 OBJ: TLeafI   Jet_N   Jet_N
 OBJ: TLeafElement   El_E   El_E
 OBJ: TLeafElement   El_p_T   El_p_T
 OBJ: TLeafElement   El_phi   El_phi
 OBJ: TLeafElement   El_eta   El_eta
 OBJ: TLeafElement   El_px   El_px
 OBJ: TLeafElement   El_py   El_py
 OBJ: TLeafElement   El_pz   El_pz
 OBJ: TLeafElement   El_m   El_m
 OBJ: TLeafElement   El_charge   El_charge
 OBJ: TLeafElement   El_pdgId   El_pdgId
 OBJ: TLeafElement   El_etcone20   El_etcone20
 OBJ: TLeafElement   El_etcone30   El_etcone30
 OBJ: TLeafElement   El_etcone40   El_etcone40
 OBJ: TLeafElement   El_etcone45   El_etcone45
 OBJ: TLeafElement   Mu_E   Mu_E
 OBJ: TLeafElement   Mu_p_T   Mu_p_T
 OBJ: TLeafElement   Mu_phi   Mu_phi
 OBJ: TLeafElement   Mu_eta   Mu_eta
 OBJ: TLeafElement   Mu_px   Mu_px
 OBJ: TLeafElement   Mu_py   Mu_py
 OBJ: TLeafElement   Mu_pz   Mu_pz
 OBJ: TLeafElement   Mu_m   Mu_m
 OBJ: TLeafElement   Mu_charge   Mu_charge
 OBJ: TLeafElement   Mu_pdgId   Mu_pdgId
 OBJ: TLeafElement   Jet_E   Jet_E
 OBJ: TLeafElement   Jet_p_T   Jet_p_T
 OBJ: TLeafElement   Jet_phi   Jet_phi
 OBJ: TLeafElement   Jet_eta   Jet_eta
 OBJ: TLeafElement   Jet_px   Jet_px
 OBJ: TLeafElement   Jet_py   Jet_py
 OBJ: TLeafElement   Jet_pz   Jet_pz
 OBJ: TLeafElement   Jet_m   Jet_m
 OBJ: TLeafElement   Jet_charge   Jet_charge
 OBJ: TLeafElement   Jet_pdgId   Jet_pdgId
 OBJ: TLeafElement   Jet_weight   Jet_weight
 OBJ: TLeafElement   Jet_SoftMuonWeight   Jet_SoftMuonWeight
 OBJ: TLeafElement   Jet_SoftElectronWeight   Jet_SoftElectronWeight
 OBJ: TLeafElement   Jet_IP1D   Jet_IP1D
 OBJ: TLeafElement   Jet_IP2D   Jet_IP2D
 OBJ: TLeafElement   Jet_IP3D   Jet_IP3D
 OBJ: TLeafElement   Jet_SV1   Jet_SV1
 OBJ: TLeafElement   Jet_SecVtxTagBU   Jet_SecVtxTagBU
 OBJ: TLeafElement   Jet_SV2   Jet_SV2
 OBJ: TLeafElement   El_IsEM   El_IsEM
 OBJ: TLeafElement   El_author   El_author
 OBJ: TLeafElement   Jet_SoftMuonNumTrack   Jet_SoftMuonNumTrack
 OBJ: TLeafElement   Jet_SoftElectronNumTrack   Jet_SoftElectronNumTrack
 OBJ: TLeafI   treeInstance   treeInstance
 OBJ: TLeafI   treeCounter   treeCounter
 OBJ: TLeafI   treeEventAndInstance   treeEventAndInstance
 OBJ: TLeafI   treeRunNumber   treeRunNumber
 OBJ: TLeafI   treeNInstance   treeNInstance
  • I then tried to run on the AOD i produced above in 14.4.0.
  • I was worried this would not work as i assumed that the AOD EDM would have changed between 14.4.0 and 15.1.0 but in fact it seemed to run OOTB with no errors, and cursory look at some of the NTUP contents looks quite good.
  • Can see this ntuple at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2
  • and the JO used to make it in 15.1.0 at: /afs/cern.ch/user/j/jboyd/gencomm/susy/testNtup15.1.0_2/testEV.py

 

NTUP -> PLOTS in SPYROOT

Added:
>
>
  • Need to apply final object reconstruction, isolation and overlap removal at the ntuple level
  • And then construct event level variables like sphericity, Meff and M_T
 

Revision 32009-06-23 - JamieBoyd

Line: 1 to 1
 
META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Line: 567 to 567
 
  • so seems that the genconf stage wasnt dont in the compile (with the errors above). something to do with my CMT setup?
  • enough for today!
Added:
>
>

NTUP -> PLOTS in SPYROOT

  -- JamieBoyd - 22 Jun 2009

Revision 22009-06-22 - JamieBoyd

Line: 1 to 1
 
META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Line: 50 to 50
 

First attempts at stuff

Added:
>
>

Trying ESDtoAOD

 
  • working in: ~jboyd/gencomm/susy
  • copied 1 Top (T1) ESD to: mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1
  • working in rel. 14.4.0
Line: 60 to 63
 
  • First try the ESD->AOD with no cell killing. so run like:
get_files -jo esdtoaod.py        
Changed:
<
<
# edit to point at our ESD
>
>
# edited this to look like: # steering file for ESD->AOD step # see myTopOptions.py for more info

PoolESDInput=["mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1"] DetDescrVersion='ATLAS-GEO-02-01-00' # PoolAODOutput="theoutput.AOD.pool.root" if not 'RootNtupleOutput' in dir(): RootNtupleOutput="ntuple_fromESDwhileAOD.root" doCBNT=False

readESD=True doWriteESD=False doWriteAOD=True doAOD=True doWriteTAG=False EvtMax=-1

# main jobOption include ("RecExCommon/RecExCommon_topOptions.py")

# then run like

 athena esdtoaod.py >& log &
Added:
>
>
  • Seems to work fine.
 
Added:
>
>

Trying ESD to AOD with cell killing

 
Added:
>
>
  • First i set up CVS
export CVSROOT=:gserver:isscvs.cern.ch:/local/reps/atlas
cvs co groups/UChicago/JetRecovery 
  • setup and compile
source setup.sh -tag=14.4.0,oneTest  
source $AtlasArea/AtlasOfflineRunTime/cmt/setup.sh
cd susy/groups/UChicago/JetRecovery/cmt    
cmt config 
gmake -j4   
...
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/i686-slc4-gcc34-opt.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/setup.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> (Makefile.header) Rebuilding ../i686-slc4-gcc34-opt/constituents.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> (constituents.make) Rebuilding ../i686-slc4-gcc34-opt/i686-slc4-gcc34-opt_JetRecovery_check_install_joboptions.make
#CMT---> (constituents.make) Rebuilding library links
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> (constituents.make) Building install_includes.make
#CMT---> (constituents.make) all done
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document install_includes
#CMT---> (constituents.make) Creating install_includes.lock and Starting install_includes
Installing files from standard ../JetRecovery to /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/include
installation done
#CMT---> (constituents.make) install_includes done
#CMT---> (constituents.make) Building JetRecovery.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (constituents.make) Rebuilding ../i686-slc4-gcc34-opt/setup_JetRecovery_check_install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCExternal)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Info: Library JetRecovery
#CMT---> (constituents.make) Starting JetRecovery
#CMT---> (JetRecovery.make) Rebuilding ../i686-slc4-gcc34-opt/JetRecovery_dependencies.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (constituents.make) Building JetRecovery_check_install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document JetRecovery_check_install_joboptions
#CMT---> (constituents.make) Creating JetRecovery_check_install_joboptions.lock and Starting JetRecovery_check_install_joboptions
#CMT---> (constituents.make) JetRecovery_check_install_joboptions done
#CMT---> (constituents.make) Building install_joboptions.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document install_joboptions
#CMT---> (constituents.make) Creating install_joboptions.lock and Starting install_joboptions
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> installing file BuildClusters.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> installing file CellKiller.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file DumpTracks.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> compiling ../src/CellKiller.cxx
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> installing file InputFiles14022003.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> installing file InputFiles14010003.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> compiling ../src/MathUtil.cxx
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> compiling ../src/NtupleDumper.cxx
#CMT---> installing file JetAlgs.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
../src/CellKiller.cxx:190: warning: unused parameter 'gain'
../src/CellKiller.cxx:190: warning: unused parameter 'channel'
../src/CellKiller.cxx:185: warning: unused parameter 'id'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> compiling ../src/components/JetRecovery_entries.cxx
#CMT---> installing file JetRecovery_topOptions.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> compiling ../src/components/JetRecovery_load.cxx
#CMT---> installing file NtupleDumper.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> (JetRecovery.make) PEDANTIC: ../i686-slc4-gcc34-opt//JetRecoverysetup.make: No rule for such target
#CMT---> (JetRecovery.make): ../i686-slc4-gcc34-opt//JetRecoverysetup.make: File no longer generated
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
../src/NtupleDumper.cxx: In member function `bool NtupleDumper::passTrackQualityCuts(Rec::TrackParticle*)':
../src/NtupleDumper.cxx:433: warning: unused variable 'primVertex'
../src/NtupleDumper.cxx:441: warning: unused variable 'phi0'
../src/NtupleDumper.cxx: In member function `void NtupleDumper::getConesFromTracks(std::vector<Cone, std::allocator<Cone> >&, std::vector<Rec::TrackParticle*, std::allocator<Rec::TrackParticle*> >&, const double&, const double&, const double&, const int&)':
../src/NtupleDumper.cxx:482: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:506: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:513: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:525: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:551: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx: In member function `StatusCode NtupleDumper::gatherObservables()':
../src/NtupleDumper.cxx:755: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:762: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:772: warning: unused variable 'caloSample'
../src/NtupleDumper.cxx:786: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:810: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:816: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:842: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:847: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:849: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:958: warning: comparison between signed and unsigned integer expressions
../src/NtupleDumper.cxx:974: warning: comparison between signed and unsigned integer expressions
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> installing file NtupleDumper_topOptions.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file SaveClusters.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> building library
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> installing file SaveJets.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file TopAlgFix.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
installation done
installation done
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file TrackTools.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
installation done
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> installing file Trigger.py into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery
installation done
#CMT---> (constituents.make) install_joboptions done
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
g++ -m32 -m32 -m32 -L/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasOffline/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasAnalysis/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasSimulation/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/dist/AtlasSettings/AtlasSettings-03-02-17/share/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasTrigger/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasReconstruction/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasEvent/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasConditions/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/GAUDI/v19r9p2/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/DetCommon/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/LCGCMT/LCGCMT_54h/InstallArea/i686-slc4-gcc34-opt/lib -shared -m32 -o libJetRecovery.so "JetRecoverytemp_shlib/CellKiller.o" "JetRecoverytemp_shlib/JetRecovery_entries.o" "JetRecoverytemp_shlib/JetRecovery_load.o" "JetRecoverytemp_shlib/MathUtil.o" "JetRecoverytemp_shlib/NtupleDumper.o" -shared -fPIC -ldl -pthread -Wl,--no-undefined -m32 -Wl,-s -m32 -L/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasOffline/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasAnalysis/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasSimulation/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/dist/AtlasSettings/AtlasSettings-03-02-17/share/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasTrigger/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasReconstruction/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasEvent/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasConditions/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/GAUDI/v19r9p2/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/software/builds/DetCommon/14.4.0/InstallArea/i686-slc4-gcc34-opt/lib -L/afs/cern.ch/atlas/offline/external/LCGCMT/LCGCMT_54h/InstallArea/i686-slc4-gcc34-opt/lib -lAnalysisUtilsLib -lMcParticleEvent -lMissingETEvent -lTruthHelper -lParticleTruth -lGeneratorObjects -lAthenaBaseComps -lJetRecLib -lJetUtils -lCaloUtilsLib -lCaloEvent -lTileConditionsLib -lCaloDetDescrLib -lLArReadoutGeometry -lLArHV -lLArToolsLib -lLArIdentifier -lTileIdentifier -lCaloIdentifier -lGeoModelSvcLib -lIOVSvcLib -lTrigDecisionLib -lTrigSteeringLib -lTrigMonitorBaseLib -lTrigInterfacesLib -lAthenaMonitoringLib -lTrigSteeringEvent -lTrigNavigationLib -lTrigSerializeCnvSvcLib -lTrigSerializeTPLib -lAthenaPoolCnvSvcLib -lTrigConfigSvcLib -lStoreGateLib -lEventInfo -lJetEvent -lParticleEvent -lFourMomUtils -lNavFourMom -lParticle -lAtlfastEvent -lFourMom -lNavigation -lTrkParticleBase -lVxVertex -lTrkTrack -lTrkExUtils -lTrkPatternParameters -lTrkVolumes -lTrkParameters -lTrkNeutralParameters -lTrkParametersBase -lTrkMaterialOnTrack -lTrkGeometrySurfaces -lTrkSurfaces -lTrkDetDescrUtils -lIOVDbDataModel -lTrkPrepRawData -lTrigT1Result -lTrigT1Interfaces -lDataModel -lDBDataModel -lAtlasDetDescr -lCaloConditions -lTrigSerializeResultLib -lSGTools -lSGAudCore -lAraTool -lCBNT_UtilsLib -lOjfJet -lAthenaKernel -lCxxUtils -lTrkEventPrimitives -lTrkDetElementBase -lIdDict -lIdentifier -lGeoModelKernel -lTrkTrackSummary -lPathResolver -lTestTools -lKtJet -lTileCalibBlobObjs -lGenzModuleEvent -lTrigTimeAlgsLib -L/afs/cern.ch/atlas/project/tdaq/prod/tdaq-common/tdaq-common-01-09-03/installed/i686-slc4-gcc34-opt/lib -leformat -leformat_write -lDataReader -leformat_old -lDataWriter -ldl -lthreads -lers -ldynlibs -L/afs/cern.ch/sw/lcg/external/HepMC/2.03.09/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lHepMC -Wl,--as-needed -L/afs/cern.ch/sw/lcg/external/HepMC/2.03.09/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lHepMC -Wl,--as-needed -lGaudiPythonLib -lGaudiAlgLib -lGaudiUtilsLib -lGaudiKernel -lTrigConfStorage -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lReflex -L/afs/cern.ch/sw/lcg/app/releases/POOL/POOL_2_7_7/slc4_ia32_gcc34/lib -llcg_CollectionBase -llcg_CollectionBase -llcg_Collection -llcg_FileCatalog -llcg_DataSvc -llcg_PersistencySvc -llcg_StorageSvc -llcg_AttributeList -llcg_POOLCore -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lMathMore -lMinuit -lMinuit2 -lMatrix -lPhysics -lHistPainter -lHist -lRint -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lCore -lCint -lTree -lHist -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lGraf -lGraf3d -lGpad -lHtml -lPostscript -lGui -lGX11TTF -lGX11 -L/afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/lib -lTable -lRIO -L/afs/cern.ch/sw/lcg/external/Python/2.5/slc4_ia32_gcc34/lib -lpython2.5 -lutil -lpthread -L/afs/cern.ch/sw/lcg/external/fastjet/2.3.0/slc4_ia32_gcc34/lib -Wl,--no-as-needed -lfastjet -lsiscone -lSISConePlugin -lCDFConesPlugin -Wl,--as-needed -L/afs/cern.ch/sw/lcg/app/releases/COOL/COOL_2_4_0b/slc4_ia32_gcc34/lib -llcg_CoolKernel -L/afs/cern.ch/sw/lcg/app/releases/SEAL/SEAL_1_9_4/slc4_ia32_gcc34/lib -llcg_SealBase -llcg_PluginManager -llcg_SealKernel -L/afs/cern.ch/sw/lcg/app/releases/CORAL/CORAL_1_9_8/slc4_ia32_gcc34/lib -llcg_CoralBase -llcg_RelationalAccess -L/afs/cern.ch/sw/lcg/external/Boost/1.34.1_python2.5/slc4_ia32_gcc34/lib -lboost_filesystem-gcc34-mt -lboost_regex-gcc34-mt -lboost_thread-gcc34-mt -lboost_filesystem-gcc34-mt -L/afs/cern.ch/sw/lcg/external/clhep/1.9.3.1/slc4_ia32_gcc34/lib -lCLHEP-Cast-1.9.3.1 -lCLHEP-Evaluator-1.9.3.1 -lCLHEP-Exceptions-1.9.3.1 -lCLHEP-GenericFunctions-1.9.3.1 -lCLHEP-Geometry-1.9.3.1 -lCLHEP-RandomObjects-1.9.3.1 -lCLHEP-RefCount-1.9.3.1 -lCLHEP-Matrix-1.9.3.1 -Wl,--no-as-needed -lCLHEP-Vector-1.9.3.1 -lCLHEP-Random-1.9.3.1 -Wl,--as-needed -L/afs/cern.ch/sw/lcg/external/uuid/1.38/slc4_ia32_gcc34/lib -luuid -L/afs/cern.ch/sw/lcg/external/XercesC/2.8.0/slc4_ia32_gcc34/lib -lxerces-c -lxerces-depdom -lpthread -L/afs/cern.ch/sw/lcg/external/HepPDT/2.02.02/slc4_ia32_gcc34/lib -lHepPDT -lHepPID -lHepPID -lTrigConfHLTData -lTrigConfL1Data -lTrigConfJobOptData
Installing library libJetRecovery.so into /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/i686-slc4-gcc34-opt/lib
------> JetRecovery : library ok
installation done
#CMT---> JetRecovery ok
#CMT---> (constituents.make) JetRecovery done
#CMT---> (constituents.make) Building JetRecoveryConf.make
#CMT---> (constituents.make) Building JetRecoveryCLIDDB.make
#CMT---> (constituents.make) Building JetRecoveryRootMap.make
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: Structuring style used `without_version_directory'. Could not determine version in `../cmt'. Default version `v*'
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from TDAQCPolicy)
#CMT---> Warning: template <src_dir> not expected in pattern install_scripts (from eformat)
#CMT---> Warning: template <files> not expected in pattern install_scripts (from eformat)
#CMT---> Info: Document JetRecoveryConf
#CMT---> (constituents.make) Creating JetRecoveryConf.lock and Starting JetRecoveryConf
#CMT---> Info: Document JetRecoveryRootMap
#CMT---> Info: Document JetRecoveryCLIDDB
#CMT---> (constituents.make) Creating JetRecoveryRootMap.lock and Starting JetRecoveryRootMap
#CMT---> (constituents.make) Creating JetRecoveryCLIDDB.lock and Starting JetRecoveryCLIDDB
Generating rootmap file for libJetRecovery.so
------> genCLIDDB.exe [JetRecovery]
:::::: libraries : [ JetRecovery ] ::::::
:::: processing library: JetRecovery...
PackageInfo::PackageInfo(v*): invalid argument
PackageInfo should be constructed passing a string of the form PACKAGE-VERSION.
Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form
MyPackage-01-02-03
Notice that version.cmt is created automatically by CMT when you use 'cmt co' 

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown
   was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo
   Parameters = 
   Qualifiers = 'ers' 
   host = lxplus249.cern.ch
   user = jboyd (6573)
   process id = 18827
   thread id = 18827
   process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/i686-slc4-gcc34-opt
/bin/sh: line 1: 18827 Aborted                 /afs/cern.ch/sw/lcg/external/root/5.18.00d/slc4_ia32_gcc34/root/bin/genmap -i libJetRecovery.so -o ../i686-slc4-gcc34-opt/JetRecovery.rootmap
gmake[3]: *** [../i686-slc4-gcc34-opt/JetRecovery.rootmap] Error 134
gmake[2]: *** [JetRecoveryRootMap] Error 2
gmake[2]: *** Waiting for unfinished jobs....
PackageInfo::PackageInfo(v*): invalid argument
PackageInfo should be constructed passing a string of the form PACKAGE-VERSION.
Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form
MyPackage-01-02-03
Notice that version.cmt is created automatically by CMT when you use 'cmt co' 

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown
   was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo
   Parameters = 
   Qualifiers = 'ers' 
   host = lxplus249.cern.ch
   user = jboyd (6573)
   process id = 18816
   thread id = 18816
   process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/cmt
gmake[3]: *** [/afs/cern.ch/user/j/jboyd/gencomm/susy/groups/UChicago/JetRecovery/genConf/JetRecovery/JetRecoveryConf.py] Aborted
gmake[2]: *** [JetRecoveryConf] Error 2
::: ERROR during 'genCLIDDB.exe' execution... (exit code=34304)
Generating clid.db for package JetRecovery.
Resulting clid.db will be written to /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db.
ApplicationMgr    SUCCESS 
====================================================================================================================================
                                                   Welcome to ApplicationMgr $Revision: 1.72 $
                                          running on lxplus249.cern.ch on Mon Jun 22 20:37:12 2009
====================================================================================================================================
ApplicationMgr       INFO Application Manager Configured successfully
EventLoopMgr      WARNING Unable to locate service "EventSelector" 
EventLoopMgr      WARNING No events will be processed from external input.
HistogramPersis...   INFO  'CnvServices':[ 'HbookHistSvc' , 'RootHistSvc' ]
HistogramPersis...WARNING Histograms saving not required.
ApplicationMgr       INFO Application Manager Initialized successfully
ApplicationMgr Ready
ClassIDSvc           INFO Initializing ClassIDSvc - package version CLIDComps-00-04-08
ClassIDSvc           INFO  getRegistryEntries: read 0 CLIDRegistry entries for module ALL
PackageInfo::PackageInfo(v*): invalid argument
PackageInfo should be constructed passing a string of the form PACKAGE-VERSION.
Usually this error occurs because CMT can not determine the version of your package. Please make sure that there is a version.cmt file in the cmt directory of your package and that version.cmt contains a single line of the form
MyPackage-01-02-03
Notice that version.cmt is created automatically by CMT when you use 'cmt co' 

FATAL 2009-Jun-22 20:37:13 [static void ers::ErrorHandler::terminate_handler(...) at ers/src/ErrorHandler.cxx:125] Unhandled 'std::exception' exception was thrown
   was caused by: ERROR 2009-Jun-22 20:37:13 [ers::Issue::Issue(const ers::Context&, const std::exception&) at ers/src/Issue.cxx:90] PackageInfo::PackageInfo
   Parameters = 
   Qualifiers = 'ers' 
   host = lxplus249.cern.ch
   user = jboyd (6573)
   process id = 18835
   thread id = 18835
   process wd = /afs/cern.ch/user/g/gencomm/w0/jboyd/susy/groups/UChicago/JetRecovery/cmt
Reading clid.db from /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db.
sh: line 1: 18835 Aborted                 /afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/i686-slc4-gcc34-opt/bin/genCLIDDB.exe -p JetRecovery -i/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db -o /afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db
cp: cannot stat `/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/JetRecovery_clid.db': No such file or directory
gmake[3]: *** [/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/share/clid.db] Error 1
gmake[2]: *** [JetRecoveryCLIDDB] Error 2
gmake[1]: *** [common_target] Error 2
gmake: *** [check_config] Error 2
  • Not sure if this is OK?
  • I then copied JetRecovery_topOptions.py into my run dir and edited to have:
    if esdVersion=='14010003':
        PoolESDInput=["mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1"]
        DetDescrVersion='ATLAS-GEO-02-01-00'
  • and then tried to run
>athena.py  -c "baseName='JetRecovery'; EvtMax=-1; KillCalo=2; startFromJ5=0; upToJ5=1; doRebuild=True; esdVersion='14010003'" ./JetRecovery_topOptions.py 
Mon Jun 22 21:00:22 CEST 2009
Py:ConfigurableDb    INFO Read module info for 3828 configurables from 9 genConfDb files
Py:ConfigurableDb    INFO No duplicates have been found: that's good !
Py:Athena            INFO including file "AthenaCommon/Bootstrap.py"
Py:Athena            INFO including file "AthenaCommon/Atlas.UnixStandardJob.py"
Py:Athena            INFO executing CLI (-c) command: "baseName='JetRecovery'; EvtMax=-1; KillCalo=2; startFromJ5=0; upToJ5=1; doRebuild=True; esdVersion='14010003'"
Py:Athena            INFO including file "./JetRecovery_topOptions.py"
KillCalo =  2
doRebuild =  True
Py:Athena            INFO including file "JetRecovery/SaveJets.py"
Py:Athena            INFO including file "JetRecovery/CellKiller.py"
Shortened traceback (most recent user call last):
  File "/afs/cern.ch/atlas/software/builds/AtlasCore/14.4.0/InstallArea/share/bin/athena.py", line 434, in <module>
    include( script )
  File "./JetRecovery_topOptions.py", line 47, in <module>
    include("JetRecovery/CellKiller.py")
  File "/afs/cern.ch/user/g/gencomm/w0/jboyd/InstallArea/jobOptions/JetRecovery/CellKiller.py", line 4, in <module>
    from JetRecovery.JetRecoveryConf import CellKiller
ImportError: No module named JetRecovery.JetRecoveryConf
Py:Athena            INFO leaving with code 3: "an error occurred when importing a file"
  • so seems that the genconf stage wasnt dont in the compile (with the errors above). something to do with my CMT setup?
  • enough for today!
 

-- JamieBoyd - 22 Jun 2009 \ No newline at end of file

Revision 12009-06-22 - JamieBoyd

Line: 1 to 1
Added:
>
>
META TOPICPARENT name="JamiesWiki"

1-lepton SUSY analysis with calo killing

Intro

  • Following instructions from Heather Gray on using CellKiller by Eric Feng and Georgios Choudalakis
  • instructions here
Hi Heather,

As Georgios mentioned, we found it easiest to just kill cells:
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/src/CellKiller.cxx?view=markup

since this works directly on ESD.  In the same job we rebuild clusters from the modified cells, as well as jets and MET on the fly:
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/share/BuildClusters.py?view=markup
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/share/JetAlgs.py?view=markup

You can find the topOptions here, which should be easy to understand as everything is modular:
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/share/JetRecovery_topOptions.py?view=markup

Run by doing:
athena.py -s -c "baseName='JetRecovery'; EvtMax=-1; KillCalo=2; startFromJ5=0; upToJ5=1; doRebuild=True; esdVersion='14010003'" ./JetRecovery_topOptions.py | tee log 2>&1

or similar.  An important point is to schedule the algs in the correct order so that cells are killed first; clusters, jets, and MET are built;  then ntuple is dumped last.  This is done by:
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/share/TopAlgFix.py?view=markup

Other people have written more complex tools that work on RDO, which needs to be digitized then reconstructed.  The two major ones, developed separately, are:

LAr cell-killer (Rob McPherson, et al):
https://twiki.cern.ch/twiki/bin/view/Atlas/CaloCellWeightAna

Tile cell-killer (Giorgi Arabidze, et al):
http://alxr.usatlas.bnl.gov/lxr/source/atlas/TileCalorimeter/TileRecUtils/src/TileCellMaskingTool.cxx?v=head#063

The former can kill both LAr and Tile components.  The latter provides TileCellMaskingTool::killer() to choose which Tile drawer, motherboard, or digitizer to fail.

If you have any questions, feel free to ask.

Best,
Eric

Georgios Choudalakis wrote:
Hi Heather,
Unfortunately (or fortunately maybe) the way we killed cells was nothing too sophisticated. We simply looped through all cells from the CaloCellContainer, and used the methods CaloCell:eta() and CaloCell::phi() and CaloCell::x() ::y() ::z(), to know if a cell belonged to the problematic region.  If it belonged to it, then we used CaloCell:setEnergy(0), and that was it. It was a bit more involved to re-reconstruct jets with the cells turned off.  Eric Feng did that part.
I'm CCing him here.  He may have some advice.
Our code was made to dump objects (like cone jets, truth jets, MET etc) into a custom ntuple (CBNT).  You are welcome to look at it from CVS:
http://atlas-sw.cern.ch/cgi-bin/viewcvs-atlas.cgi/groups/UChicago/JetRecovery/
Best regards,
Georgios

First attempts at stuff

  • working in: ~jboyd/gencomm/susy
  • copied 1 Top (T1) ESD to: mc08.105200.T1_McAtNlo_Jimmy.recon.ESD.e357_s462_r635_tid063975/ESD.063975._03430.pool.root.1
  • working in rel. 14.4.0
source setup.sh -tag=14.4.0  
source $AtlasArea/AtlasOfflineRunTime/cmt/setup.sh         
  • First try the ESD->AOD with no cell killing. so run like:
get_files -jo esdtoaod.py        
# edit to point at our ESD
athena esdtoaod.py >& log &         

-- JamieBoyd - 22 Jun 2009

 
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