HowToSubmitJobsToBIRDCluster < Sandbox

-- Main.AlbertoGasconBravo - 2014-12-03

---+++ *Job submitting to BIRD:*

First, login into NAF:

* ssh -X -l gascon naf-atlas.desy.de

My NFS directory is under /nfs/dust/atlas/user/gascon. A sample job Macro is in /nfs/dust/atlas/user/gascon/job_macro.sh. It loads the shell, the environment variables, and sets a python version recent enough.

To send jobs one has to run

qsub *-v QUEUE* ="long.q"<b> -l h_rt</b>=80:00:00<b> -l h_vmem</b>=20G *-M* alberto.gascon.bravo@desy.de *-m* bea job_macro.sh

   * -v QUEUE lets you choose to which queue send the job 
   * -l h_rt sets a maximum execution time. If the job reaches this time and hasn't finished, it will be receive a KILL signal. Each queue has a defult maximum time that can be overriden this way 
   * -M sets a mail address to send job notifications 
   * -m sets whether the mail should be sent after the end(*s*), begin(*b*), abort(*a*) or suspend(*s*) of the batch jobs

This topic: Sandbox > TWikiUsers > AlbertoGasconBravo > AlbertoGasconBravoSandbox > HowToSubmitJobsToBIRDCluster
Topic revision: r2 - 2014-12-03 - unknown

Copyright &© 2008-2022 by the contributing authors. All material on this collaboration platform is the property of the contributing authors.
or Ideas, requests, problems regarding TWiki? use Discourse or Send feedback